From 901b9f16494f37890be17ef4bb66e6efc6873340 Mon Sep 17 00:00:00 2001
From: Jaron Kent-Dobias <jaron@kent-dobias.com>
Date: Fri, 10 Feb 2017 12:18:11 -0500
Subject: changed code to rely on jst

---
 lib/bound_set.c | 102 ++++++++++++++++++++++++++++++++++++++++++++++++++++++++
 1 file changed, 102 insertions(+)
 create mode 100644 lib/bound_set.c

(limited to 'lib/bound_set.c')

diff --git a/lib/bound_set.c b/lib/bound_set.c
new file mode 100644
index 0000000..65f1e6f
--- /dev/null
+++ b/lib/bound_set.c
@@ -0,0 +1,102 @@
+
+#include "fracture.h"
+
+double th_p(double x, double y, double th) {
+	if (x >= 0 && y >= 0) return th;
+	else if (x <  0 && y >= 0) return M_PI - th;
+	else if (x <  0 && y <  0) return th - M_PI;
+	else return -th;
+
+}
+
+double u_y(double x, double y) {
+	double r = sqrt(pow(x, 2) + pow(y, 2));
+	double th = th_p(x, y, atan(fabs(y / x)));
+
+	return sqrt(r) * sin(th / 2);
+}
+
+void bound_set_embedded(double *bound, const graph_t *g, double notch_len) {
+	uint_t L = g->L;
+
+	for (uint_t i = 0; i < L / 2; i++) {
+		double x1, y1, x2, y2, x3, y3, x4, y4;
+		x1 = (2. * i + 1.) / L - notch_len; y1 = 0.5 - 1.;
+		x2 = (2. * i + 1.) / L - notch_len; y2 = 0.5 - 0.;
+		y3 = (2. * i + 1.) / L - 0.5; x3 = 0.5 - 1.;
+		y4 = (2. * i + 1.) / L - 0.5; x4 = 0.5 - 0.;
+
+		bound[g->b[g->bi[0] + i]] = u_y(x1, y1);
+		bound[g->b[g->bi[1] + i]] = u_y(x2, y2);
+		bound[g->b[g->bi[2] + i]] = u_y(x3, y3);
+		bound[g->b[g->bi[3] + i]] = u_y(x4, y4);
+	}
+}
+
+bool is_in(uint_t len, uint_t *list, uint_t element) {
+	for (uint_t i = 0; i < len; i++) {
+		if (list[i] == element) { 
+			return true;
+		}
+	}
+	return false;
+}
+
+cholmod_dense *bound_set(const graph_t *g, bool vb, double notch_len, cholmod_common *c) {
+
+	uint_t dim = g->nv;
+
+	if (vb && g->boundary != TORUS_BOUND) {
+		dim -= g->bi[g->nb];
+	} else if (!vb) {
+		dim += 2;
+	}
+
+	cholmod_dense *boundary = CHOL_F(zeros)(dim, 1, CHOLMOD_REAL, c);
+	double *bound = (double *)boundary->x;
+
+	switch (g->boundary) {
+		case TORUS_BOUND:
+			for (uint_t i = 0; i < g->bi[1]; i++) {
+				uint_t be = g->b[i];
+				uint_t v1 = g->ev[2 * be];
+				uint_t v2 = g->ev[2 * be + 1];
+				double v1y = g->vx[2 * v1 + 1];
+				double v2y = g->vx[2 * v2 + 1];
+
+				uint_t ind = v1y < v2y ? 0 : 1;
+
+				bound[g->ev[2 * be + ind]] += 1;
+				bound[g->ev[2 * be + !ind]] -= 1;
+			}
+			break;
+			/*
+		case EMBEDDED_BOUND:
+			bound_set_embedded(bound, g, notch_len);
+			break;
+			*/
+		default:
+			if (vb) {
+				for (uint_t i = 0; i < dim; i++) {
+					uint_t v = g->nbi[i];
+					for (uint_t j = 0; j < g->vei[v+1] - g->vei[v]; j++) {
+						uint_t e = g->ve[g->vei[v] + j];
+						uint_t v0 = g->ev[2 * e];
+						uint_t v1 = g->ev[2 * e + 1];
+
+						if (g->bq[v0] || g->bq[v1]) {
+							uint_t vv = v0 == v ? v1 : v0;
+							if (is_in(g->bi[1], g->b, vv)) {
+								bound[i]++;
+							}
+						}
+					}
+				}
+			} else {
+				bound[g->nv] = 1;
+				bound[g->nv + 1] = -1;
+			}
+	}
+
+	return boundary;
+}
-- 
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