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authorpants <jaron@kent-dobias.com>2016-11-21 18:53:58 -0500
committerpants <jaron@kent-dobias.com>2016-11-21 18:53:58 -0500
commitae8014ad662e485f54ea578be67daa477b3936f0 (patch)
treeec26cf51262d20b30ce0135ff899307891e07dbf
parent4407982c990594a90db9184e3de8fba394ee096b (diff)
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added support for controlling disorder by random initial bond breaking
-rw-r--r--src/break_edge.c1
-rw-r--r--src/corr_test.c2
-rw-r--r--src/fracture.c66
-rw-r--r--src/fracture.h3
-rw-r--r--src/gen_laplacian.c4
-rw-r--r--src/net.c24
6 files changed, 66 insertions, 34 deletions
diff --git a/src/break_edge.c b/src/break_edge.c
index 538b88d..7fe7161 100644
--- a/src/break_edge.c
+++ b/src/break_edge.c
@@ -3,6 +3,7 @@
bool break_edge(net_t *instance, uint_t edge, cholmod_common *c, bool refactor) {
instance->fuses[edge] = true;
+ instance->num_broken++;
if (instance->factor != NULL) {
if (refactor) {
diff --git a/src/corr_test.c b/src/corr_test.c
index 4dc7efc..5011ecc 100644
--- a/src/corr_test.c
+++ b/src/corr_test.c
@@ -8,7 +8,7 @@ int main() {
unsigned int width = 64;
graph_t *network = graph_create(VORONOI_LATTICE, TORUS_BOUND, 128, false, &c);
- net_t *instance = net_create(network, 1e-14, 3, 0, true, &c);
+ net_t *instance = net_create(network, 1e-14, 3, 0, true, false, &c);
net_fracture(instance, &c, 1e-10, 40);
double *corr = get_corr(instance, NULL, &c);
diff --git a/src/fracture.c b/src/fracture.c
index 59bd424..6050182 100644
--- a/src/fracture.c
+++ b/src/fracture.c
@@ -10,7 +10,7 @@ int main(int argc, char *argv[]) {
uint32_t N;
uint_t L, refactor_every;
double beta, inf, cutoff, crack_len;
- bool save_data, save_cluster_dist, use_voltage_boundaries, use_dual, save_network,
+ bool save_data, save_cluster_dist, use_voltage_boundaries, use_dual, use_perc, save_network,
save_crit_stress, save_stress_field, save_voltage_field, save_energy, save_conductivity,
save_damage, save_damage_field, save_threshold;
bound_t boundary;
@@ -44,8 +44,9 @@ int main(int argc, char *argv[]) {
save_damage = false;
save_damage_field = false;
save_conductivity = false;
- save_energy = true;
+ save_energy = false;
save_threshold = false;
+ use_perc = false;
uint8_t bound_i;
@@ -53,11 +54,12 @@ int main(int argc, char *argv[]) {
uint8_t lattice_i;
char lattice_c = 'v';
char dual_c = 'o';
+ char perc_c = 't';
// get commandline options
- while ((opt = getopt(argc, argv, "n:L:b:B:q:dVcoNsCrDSvel:TER:")) != -1) {
+ while ((opt = getopt(argc, argv, "n:L:b:B:q:dVcoNsCrDSvel:TER:p")) != -1) {
switch (opt) {
case 'n':
N = atoi(optarg);
@@ -74,6 +76,10 @@ int main(int argc, char *argv[]) {
case 'l':
crack_len = atof(optarg);
break;
+ case 'p':
+ use_perc = true;
+ perc_c = 'b';
+ break;
case 'B':
bound_i = atoi(optarg);
switch (bound_i) {
@@ -170,7 +176,7 @@ int main(int argc, char *argv[]) {
FILE *data_out;
if (save_data) {
char *data_filename = (char *)malloc(filename_len * sizeof(char));
- snprintf(data_filename, filename_len, "data_%c_%c_%c_%c_%u_%g_%g.txt", lattice_c, dual_c, boundc, boundc2, L, beta, crack_len);
+ snprintf(data_filename, filename_len, "data_%c_%c_%c_%c_%c_%u_%g_%g.txt", perc_c, lattice_c, dual_c, boundc, boundc2, L, beta, crack_len);
data_out = fopen(data_filename, "a");
free(data_filename);
}
@@ -198,8 +204,8 @@ int main(int argc, char *argv[]) {
c_filename = (char *)malloc(filename_len * sizeof(char));
a_filename = (char *)malloc(filename_len * sizeof(char));
- snprintf(c_filename, filename_len, "cstr_%c_%c_%c_%c_%d_%g_%g.dat", lattice_c, dual_c, boundc, boundc2, L, beta, crack_len);
- snprintf(a_filename, filename_len, "avln_%c_%c_%c_%c_%d_%g_%g.dat", lattice_c, dual_c, boundc, boundc2, L, beta, crack_len);
+ snprintf(c_filename, filename_len, "cstr_%c_%c_%c_%c_%c_%d_%g_%g.dat", perc_c, lattice_c, dual_c, boundc, boundc2, L, beta, crack_len);
+ snprintf(a_filename, filename_len, "avln_%c_%c_%c_%c_%c_%d_%g_%g.dat", perc_c, lattice_c, dual_c, boundc, boundc2, L, beta, crack_len);
FILE *cluster_out = fopen(c_filename, "rb");
FILE *avalanche_out = fopen(a_filename, "rb");
@@ -250,7 +256,7 @@ int main(int argc, char *argv[]) {
(uint32_t *)calloc(max_edges, sizeof(uint32_t));
d_filename = (char *)malloc(filename_len * sizeof(char));
- snprintf(d_filename, filename_len, "damg_%c_%c_%c_%c_%d_%g_%g.dat", lattice_c, dual_c, boundc, boundc2, L, beta, crack_len);
+ snprintf(d_filename, filename_len, "damg_%c_%c_%c_%c_%c_%d_%g_%g.dat", perc_c, lattice_c, dual_c, boundc, boundc2, L, beta, crack_len);
FILE *damage_out = fopen(d_filename, "rb");
@@ -292,7 +298,14 @@ int main(int argc, char *argv[]) {
printf("\033[F\033[JFRACTURE: %0*d / %d\n", (uint8_t)log10(N) + 1, i + 1, N);
graph_t *g = graph_create(lattice, boundary, L, use_dual, &c);
- net_t *net = net_create(g, inf, beta, crack_len, use_voltage_boundaries, &c);
+ net_t *net = net_create(g, inf, beta, crack_len, use_voltage_boundaries, use_perc, &c);
+ if (net->marks[g->nv] != net->marks[g->nv+1]) {
+ if (save_crit_stress) crit_stress[i] = 0;
+ if (save_conductivity) conductivity[i] = 0;
+ if (save_damage) damage[net->num_broken]++;
+ if (save_energy) energy[i] = 0;
+ if (save_threshold) thresholds[i] = 0;
+ } else {
net_t *tmp_net = net_copy(net, &c);
data_t *data = net_fracture(tmp_net, &c, cutoff, refactor_every);
net_free(tmp_net, &c);
@@ -349,7 +362,7 @@ int main(int argc, char *argv[]) {
}
}
- if (save_damage) damage[max_pos]++;
+ if (save_damage) damage[net->num_broken]++;
if (save_stress_field || save_voltage_field) {
double *tmp_voltages = net_voltages(net, &c);
@@ -412,6 +425,17 @@ int main(int argc, char *argv[]) {
free(tmp_cluster_dist);
}
+
+ if (save_data) {
+ for (uint_t j = 0; j < data->num_broken; j++) {
+ fprintf(data_out, "%u %Lg %g ", data->break_list[j],
+ data->extern_field[j], data->conductivity[j]);
+ }
+ fprintf(data_out, "\n");
+ }
+
+ data_free(data);
+ }
if (save_network) {
FILE *net_out = fopen("network.txt", "w");
for (uint_t j = 0; j < g->nv; j++) {
@@ -440,16 +464,6 @@ int main(int argc, char *argv[]) {
net_free(net, &c);
graph_free(g, &c);
-
- if (save_data) {
- for (uint_t j = 0; j < data->num_broken; j++) {
- fprintf(data_out, "%u %Lg %g ", data->break_list[j],
- data->extern_field[j], data->conductivity[j]);
- }
- fprintf(data_out, "\n");
- }
-
- data_free(data);
}
printf("\033[F\033[JFRACTURE: COMPLETE\n");
@@ -472,7 +486,7 @@ int main(int argc, char *argv[]) {
if (save_voltage_field) {
char *vfld_filename = (char *)malloc(filename_len * sizeof(char));
- snprintf(vfld_filename, filename_len, "vfld_%c_%c_%c_%c_%d_%g_%g.dat", lattice_c, dual_c, boundc, boundc2, L, beta, crack_len);
+ snprintf(vfld_filename, filename_len, "vfld_%c_%c_%c_%c_%c_%d_%g_%g.dat", perc_c, lattice_c, dual_c, boundc, boundc2, L, beta, crack_len);
FILE *vfld_file = fopen(vfld_filename, "ab");
fwrite(voltage_field, sizeof(double), 3 * voltage_pos, vfld_file);
fclose(vfld_file);
@@ -482,7 +496,7 @@ int main(int argc, char *argv[]) {
if (save_stress_field) {
char *cfld_filename = (char *)malloc(filename_len * sizeof(char));
- snprintf(cfld_filename, filename_len, "cfld_%c_%c_%c_%c_%d_%g_%g.dat", lattice_c, dual_c, boundc, boundc2, L, beta, crack_len);
+ snprintf(cfld_filename, filename_len, "cfld_%c_%c_%c_%c_%c_%d_%g_%g.dat", perc_c, lattice_c, dual_c, boundc, boundc2, L, beta, crack_len);
FILE *cfld_file = fopen(cfld_filename, "ab");
fwrite(stress_field, sizeof(double), 3 * stress_pos, cfld_file);
fclose(cfld_file);
@@ -492,7 +506,7 @@ int main(int argc, char *argv[]) {
if (save_damage_field) {
char *dfld_filename = (char *)malloc(filename_len * sizeof(char));
- snprintf(dfld_filename, filename_len, "dfld_%c_%c_%c_%c_%d_%g_%g.dat", lattice_c, dual_c, boundc, boundc2, L, beta, crack_len);
+ snprintf(dfld_filename, filename_len, "dfld_%c_%c_%c_%c_%c_%d_%g_%g.dat", perc_c, lattice_c, dual_c, boundc, boundc2, L, beta, crack_len);
FILE *dfld_file = fopen(dfld_filename, "ab");
fwrite(damage_field, sizeof(double), 2 * damage_pos, dfld_file);
fclose(dfld_file);
@@ -502,7 +516,7 @@ int main(int argc, char *argv[]) {
if (save_conductivity) {
char *cond_filename = (char *)malloc(filename_len * sizeof(char));
- snprintf(cond_filename, filename_len, "cond_%c_%c_%c_%c_%d_%g_%g.dat", lattice_c, dual_c, boundc, boundc2, L, beta, crack_len);
+ snprintf(cond_filename, filename_len, "cond_%c_%c_%c_%c_%c_%d_%g_%g.dat", perc_c, lattice_c, dual_c, boundc, boundc2, L, beta, crack_len);
FILE *cond_file = fopen(cond_filename, "ab");
fwrite(conductivity, sizeof(double), N, cond_file);
fclose(cond_file);
@@ -512,7 +526,7 @@ int main(int argc, char *argv[]) {
if (save_energy) {
char *tough_filename = (char *)malloc(filename_len * sizeof(char));
- snprintf(tough_filename, filename_len, "enrg_%c_%c_%c_%c_%d_%g_%g.dat", lattice_c, dual_c, boundc, boundc2, L, beta, crack_len);
+ snprintf(tough_filename, filename_len, "enrg_%c_%c_%c_%c_%c_%d_%g_%g.dat", perc_c, lattice_c, dual_c, boundc, boundc2, L, beta, crack_len);
FILE *tough_file = fopen(tough_filename, "ab");
fwrite(energy, sizeof(long double), N, tough_file);
fclose(tough_file);
@@ -522,7 +536,7 @@ int main(int argc, char *argv[]) {
if (save_threshold) {
char *thres_filename = (char *)malloc(filename_len * sizeof(char));
- snprintf(thres_filename, filename_len, "thrs_%c_%c_%c_%c_%d_%g_%g.dat", lattice_c, dual_c, boundc, boundc2, L, beta, crack_len);
+ snprintf(thres_filename, filename_len, "thrs_%c_%c_%c_%c_%c_%d_%g_%g.dat", perc_c, lattice_c, dual_c, boundc, boundc2, L, beta, crack_len);
FILE *thres_file = fopen(thres_filename, "ab");
fwrite(thresholds, sizeof(long double), N, thres_file);
fclose(thres_file);
@@ -544,7 +558,7 @@ int main(int argc, char *argv[]) {
if (save_crit_stress) {
char *str_filename = (char *)malloc(filename_len * sizeof(char));
- snprintf(str_filename, filename_len, "strs_%c_%c_%c_%c_%d_%g_%g.dat", lattice_c, dual_c, boundc, boundc2, L, beta, crack_len);
+ snprintf(str_filename, filename_len, "strs_%c_%c_%c_%c_%c_%d_%g_%g.dat", perc_c, lattice_c, dual_c, boundc, boundc2, L, beta, crack_len);
FILE *str_file = fopen(str_filename, "ab");
fwrite(crit_stress, sizeof(long double), N, str_file);
fclose(str_file);
diff --git a/src/fracture.h b/src/fracture.h
index 556e1e5..e02bcef 100644
--- a/src/fracture.h
+++ b/src/fracture.h
@@ -83,6 +83,7 @@ typedef struct {
cholmod_sparse *adjacency;
cholmod_sparse *dual_adjacency;
bool debug_stop;
+ uint_t num_broken;
} net_t;
typedef struct {
@@ -142,7 +143,7 @@ graph_t *ini_square_network(uint_t width, bound_t boundary, bool side_bounds,
void graph_free(graph_t *network, cholmod_common *c);
void net_free(net_t *instance, cholmod_common *c);
-net_t *net_create(const graph_t *g, double inf, double beta, double notch_len, bool vb, cholmod_common *c);
+net_t *net_create(const graph_t *g, double inf, double beta, double notch_len, bool vb, bool perc, cholmod_common *c);
graph_t *ini_voro_graph(uint_t L, bound_t boundary, bool use_dual,
double *(*genfunc)(uint_t, bound_t, gsl_rng *, uint_t *),
diff --git a/src/gen_laplacian.c b/src/gen_laplacian.c
index 73416e4..42134f0 100644
--- a/src/gen_laplacian.c
+++ b/src/gen_laplacian.c
@@ -208,8 +208,8 @@ cholmod_sparse *gen_laplacian(const net_t *instance, cholmod_common *c,
for (uint_t i = 0; i < num_gverts; i++) {
- if (acoo[i] == 0)
- acoo[i] = 1;
+ if (instance->marks[i] != instance->marks[network->nv])
+ acoo[i]++;
}
assert(CHOL_F(check_triplet)(temp_m, c));
diff --git a/src/net.c b/src/net.c
index 444e76c..1be5613 100644
--- a/src/net.c
+++ b/src/net.c
@@ -1,7 +1,7 @@
#include "fracture.h"
-long double *get_thres(uint_t ne, double beta) {
+long double *get_thres(uint_t ne, double beta, bool perc) {
long double *thres = (long double *)malloc(ne * sizeof(long double));
assert(thres != NULL);
@@ -9,7 +9,8 @@ long double *get_thres(uint_t ne, double beta) {
gsl_rng_set(r, rand_seed());
for (uint_t i = 0; i < ne; i++) {
- thres[i] = rand_dist_pow(r, beta);
+ if (perc) thres[i] = 1;
+ else thres[i] = rand_dist_pow(r, beta);
}
gsl_rng_free(r);
@@ -44,14 +45,27 @@ void net_notch(net_t *net, double notch_len, cholmod_common *c) {
}
}
-net_t *net_create(const graph_t *g, double inf, double beta, double notch_len, bool vb, cholmod_common *c) {
+void net_perc(net_t *net, double p, cholmod_common *c) {
+ gsl_rng *r = gsl_rng_alloc(GSL_RAND_GEN);
+ gsl_rng_set(r, rand_seed());
+
+ for (uint_t i = 0; i < net->graph->ne; i++) {
+ double x = gsl_rng_uniform_pos(r);
+ if (!net->fuses[i] && p > x) break_edge(net, i, c, false);
+ }
+
+ gsl_rng_free(r);
+}
+
+net_t *net_create(const graph_t *g, double inf, double beta, double notch_len, bool vb, bool perc, cholmod_common *c) {
net_t *net = (net_t *)calloc(1, sizeof(net_t));
assert(net != NULL);
net->graph = g;
+ net->num_broken = 0;
net->fuses = (bool *)calloc(g->ne, sizeof(bool));
assert(net->fuses != NULL);
- net->thres = get_thres(g->ne, beta);
+ net->thres = get_thres(g->ne, beta, perc);
net->inf = inf;
net->voltage_bound = vb;
@@ -76,6 +90,8 @@ net_t *net_create(const graph_t *g, double inf, double beta, double notch_len, b
net_notch(net, notch_len, c);
+ if (perc) net_perc(net, beta, c);
+
{
cholmod_sparse *laplacian = gen_laplacian(net, c, true);
net->factor = CHOL_F(analyze)(laplacian, c);